How to cite
GREEN-DB
If you use any information from GREEN-DB please cite: GREEN-DB: a framework for the annotation and prioritization of non-coding regulatory variants in whole-genome sequencing Giacopuzzi E., Popitsch N., Taylor JC. BiorXiv (2020)
GREEN-VARAN
When you use greenvaran for annotation please cite
If you use the GREEN-VARAN Nextflow workflow for additional annotations also cite
If you include annotation with a prediction score please also cite the corresponding paper
Score |
PUBMED ID |
|---|---|
CADD |
30371827 |
DANN |
25338716 |
EIGEN |
26727659 |
ExPecto |
30013180 |
FATHMM-MKL |
25583119 |
FATHMM-XF |
28968714 |
FINSURF |
doi.org/10.1101/2021.05.03.442347 |
FIRE |
28961785 |
GenoCanyon |
26015273 |
GenoSkyline-plus |
27058395 |
GWAVA |
24487584 |
LinSight |
28288115 |
NCBoost |
30744685 |
ncER |
31748530 |
ReMM |
27569544 |
Population AF
If you use population AF annotation with GREEN-VARAN workflow also cite the gnomAD paper: The mutational constraint spectrum quantified from variation in 141,456 humans